Note: A new GRASS GIS stable version has been released: GRASS GIS 7.8. Go directly to the new manual page here
Functions to use GRASS 2D and 3D rasters with NumPy.
Usage:
>>> from __future__ import print_function
>>> import grass.script as gscript
>>> from grass.script import array as garray
>>>
>>> # We create a temporary region that is only valid in this python session
... gscript.use_temp_region()
>>> gscript.run_command("g.region", n=80, e=120, t=60, s=0, w=0, b=0, res=20, res3=20)
0
>>>
>>> # Lets create a raster map numpy array
... # based at the current region settings
... map2d_1 = garray.array()
>>>
>>> # Write some data
... for y in range(map2d_1.shape[0]):
... for x in range(map2d_1.shape[1]):
... map2d_1[y,x] = y + x
...
>>> # Lets have a look at the array
... print(map2d_1)
[[ 0. 1. 2. 3. 4. 5.]
[ 1. 2. 3. 4. 5. 6.]
[ 2. 3. 4. 5. 6. 7.]
[ 3. 4. 5. 6. 7. 8.]]
>>> # This will write the numpy array as GRASS raster map
... # with name map2d_1
... map2d_1.write(mapname="map2d_1", overwrite=True)
0
>>>
>>> # We create a new array from raster map2d_1 to modify it
... map2d_2 = garray.array(mapname="map2d_1")
>>> # Don't do map2d_2 = map2d_1 % 3
... # because: this will overwrite the internal temporary filename
... map2d_2 %= 3
>>> # Show the result
... print(map2d_2)
[[ 0. 1. 2. 0. 1. 2.]
[ 1. 2. 0. 1. 2. 0.]
[ 2. 0. 1. 2. 0. 1.]
[ 0. 1. 2. 0. 1. 2.]]
>>> # Write the result as new raster map with name map2d_2
... map2d_2.write(mapname="map2d_2", overwrite=True)
0
>>>
>>> # Here we create a 3D raster map numpy array
... # based in the current region settings
... map3d_1 = garray.array3d()
>>>
>>> # Write some data
... # Note: the 3D array has map[depth][row][column] order
... for z in range(map3d_1.shape[0]):
... for y in range(map3d_1.shape[1]):
... for x in range(map3d_1.shape[2]):
... map3d_1[z,y,x] = z + y + x
...
>>> # Lets have a look at the 3D array
... print(map3d_1)
[[[ 0. 1. 2. 3. 4. 5.]
[ 1. 2. 3. 4. 5. 6.]
[ 2. 3. 4. 5. 6. 7.]
[ 3. 4. 5. 6. 7. 8.]]
[[ 1. 2. 3. 4. 5. 6.]
[ 2. 3. 4. 5. 6. 7.]
[ 3. 4. 5. 6. 7. 8.]
[ 4. 5. 6. 7. 8. 9.]]
[[ 2. 3. 4. 5. 6. 7.]
[ 3. 4. 5. 6. 7. 8.]
[ 4. 5. 6. 7. 8. 9.]
[ 5. 6. 7. 8. 9. 10.]]]
>>> # This will write the numpy array as GRASS 3D raster map
... # with name map3d_1
... map3d_1.write(mapname="map3d_1", overwrite=True)
0
>>> # We create a new 3D array from 3D raster map3d_1 to modify it
... map3d_2 = garray.array3d(mapname="map3d_1")
>>> # Don't do map3d_2 = map3d_1 % 3
... # because: this will overwrite the internal temporary filename
... map3d_2 %= 3
>>> # Show the result
... print(map3d_2)
[[[ 0. 1. 2. 0. 1. 2.]
[ 1. 2. 0. 1. 2. 0.]
[ 2. 0. 1. 2. 0. 1.]
[ 0. 1. 2. 0. 1. 2.]]
[[ 1. 2. 0. 1. 2. 0.]
[ 2. 0. 1. 2. 0. 1.]
[ 0. 1. 2. 0. 1. 2.]
[ 1. 2. 0. 1. 2. 0.]]
[[ 2. 0. 1. 2. 0. 1.]
[ 0. 1. 2. 0. 1. 2.]
[ 1. 2. 0. 1. 2. 0.]
[ 2. 0. 1. 2. 0. 1.]]]
>>> # Write the result as new 3D raster map with name map3d_2
... map3d_2.write(mapname="map3d_2", overwrite=True)
0
(C) 2010-2012 by Glynn Clements and the GRASS Development Team This program is free software under the GNU General Public License (>=v2). Read the file COPYING that comes with GRASS for details.
Bases: numpy.core.memmap.memmap
Read raster map into array
| Parameters: |
|
|---|---|
| Returns: | 0 on success |
| Returns: | non-zero code on failure |
Deprecated since version 7.1.
Instead reading the map after creating the array, pass the map name in the array constructor.
Write array into raster map
| Parameters: |
|
|---|---|
| Returns: | 0 on success |
| Returns: | non-zero code on failure |
Bases: numpy.core.memmap.memmap
Read 3D raster map into array
| Parameters: |
|
|---|---|
| Returns: | 0 on success |
| Returns: | non-zero code on failure |
Deprecated since version 7.1.
Instead reading the map after creating the array, pass the map name in the array constructor.
Core functions to be used in Python scripts.
Usage:
from grass.script import core as grass
grass.parser()
(C) 2008-2014 by the GRASS Development Team This program is free software under the GNU General Public License (>=v2). Read the file COPYING that comes with GRASS for details.
Compare two key-value text files
This method will print a warning in case keys that are present in the first file are not present in the second one. The comparison method tries to convert the values into their native format (float, int or string) to allow correct comparison.
An example key-value text file may have this content:
a: Hello
b: 1.0
c: 1,2,3,4,5
d : hello,8,0.1
| Parameters: |
|
|---|---|
| Returns: | True if full or almost identical, False if different |
Creates environment to be passed in run_command for example. Returns tuple with temporary file path and the environment. The user of this function is responsile for deleting the file.
Create new location
Raise ScriptError on error.
| Parameters: |
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|---|
Display a debugging message using g.message -d
| Parameters: |
|
|---|
Display an error message using g.message -e
This function does not end the execution of the program. The right action after the error is up to the caller. For error handling using the standard mechanism use fatal().
| Parameters: | msg (str) – error message to be displayed |
|---|
Interface to os.execvpe(), but with the make_command() interface.
| Parameters: |
|
|---|
Display an error message using g.message -e, then abort or raise
Raises exception when module global raise_on_error is ‘True’, abort (calls exit) otherwise. Use set_raise_on_error() to set the behavior.
| Parameters: | msg (str) – error message to be displayed |
|---|
Passes all arguments to start_command(), but also adds “stdin = PIPE”. Returns the Popen object.
| Parameters: |
|
|---|---|
| Returns: | Popen object |
Returns the output from running g.findfile as a dictionary. Example:
>>> result = find_file('elevation', element='cell')
>>> print(result['fullname'])
elevation@PERMANENT
>>> print(result['file'])
/.../PERMANENT/cell/elevation
| Parameters: |
|
|---|---|
| Returns: | parsed output of g.findfile |
Attempt to run a program, with optional arguments.
You must call the program in a way that will return a successful exit code. For GRASS modules this means you need to pass it some valid CLI option, like “–help”. For other programs a common valid do-little option is usually “–version”.
Example:
>>> find_program('r.sun', '--help')
True
>>> find_program('ls', '--version')
True
| Parameters: |
|
|---|---|
| Returns: | False if the attempt failed due to a missing executable or non-zero return code |
| Returns: | True otherwise |
Return True if stderr is captured, False otherwise.
See set_capture_stderr().
Create list of available GRASS commands to use when parsing string from the command line
| Returns: | list of commands (set) and directory of scripts (collected by extension - MS Windows only) |
|---|
>>> cmds = list(get_commands()[0])
>>> cmds.sort()
>>> cmds[:5]
['d.barscale', 'd.colorlist', 'd.colortable', 'd.correlate', 'd.erase']
Return True if a ScriptError exception is raised instead of calling sys.exit(1) in case a fatal error was invoked with fatal()
Returns the real file command for a module (cmd)
For Python scripts on MS Windows it returns full path to the script and adds a ‘.py’ extension. For other cases it just returns a module (name). So, you can just use this function for all without further check.
>>> get_real_command('g.region')
'g.region'
| Parameters: | cmd – the command |
|---|
Returns the output from running g.gisenv (with no arguments), as a dictionary. Example:
>>> env = gisenv()
>>> print(env['GISDBASE'])
/opt/grass-data
:param env run with different environment :return: list of GRASS variables
Display an informational message using g.message -i
| Parameters: | msg (str) – informational message to be displayed |
|---|
Checks if the string contains only allowed characters.
This is the Python implementation of G_legal_filename() function.
..note:
It is not clear when exactly use this function, but it might be
useful anyway for checking map names and column names.
List of elements grouped by mapsets.
Returns the output from running g.list, as a dictionary where the keys are mapset names and the values are lists of maps in that mapset. Example:
>>> list_grouped('vect', pattern='*roads*')['PERMANENT']
['railroads', 'roadsmajor']
| Parameters: |
|
|---|---|
| Returns: | directory of mapsets/elements |
List of elements as pairs
Returns the output from running g.list, as a list of (name, mapset) pairs
| Parameters: |
|
|---|---|
| Returns: | list of elements |
List of elements as strings.
Returns the output from running g.list, as a list of qualified names.
| Parameters: |
|
|---|---|
| Returns: | list of elements |
Tests if location is lat/long. Value is obtained by checking the “g.region -pu” projection code.
| Returns: | True for a lat/long region, False otherwise |
|---|
Return a list of strings suitable for use as the args parameter to Popen() or call(). Example:
>>> make_command("g.message", flags = 'w', message = 'this is a warning')
['g.message', '-w', 'message=this is a warning']
| Parameters: |
|
|---|---|
| Returns: | list of arguments |
List available mapsets
| Parameters: | search_path (bool) – True to list mapsets only in search path |
|---|---|
| Returns: | list of mapsets |
Display a message using g.message
| Parameters: |
|
|---|
Parses the string “val” as a GRASS colour, which can be either one of the named colours or an R:G:B tuple e.g. 255:255:255. Returns an (r,g,b) triple whose components are floating point values between 0 and 1. Example:
>>> parse_color("red")
(1.0, 0.0, 0.0)
>>> parse_color("255:0:0")
(1.0, 0.0, 0.0)
| Parameters: |
|
|---|---|
| Returns: | tuple RGB |
Passes all arguments to read_command, then parses the output by parse_key_val().
Parsing function can be optionally given by <em>parse</em> parameter including its arguments, e.g.
parse_command(..., parse = (grass.parse_key_val, { 'sep' : ':' }))
or you can simply define <em>delimiter</em>
parse_command(..., delimiter = ':')
| Parameters: |
|
|---|---|
| Returns: | parsed module output |
Interface to g.parser, intended to be run from the top-level, e.g.:
if __name__ == "__main__":
options, flags = grass.parser()
main()
Thereafter, the global variables “options” and “flags” will be dictionaries containing option/flag values, keyed by lower-case option/flag names. The values in “options” are strings, those in “flags” are Python booleans.
Overview table of parser standard options: https://grass.osgeo.org/grass74/manuals/parser_standard_options.html
Display a progress info message using g.message -p
message(_("Percent complete..."))
n = 100
for i in range(n):
percent(i, n, 1)
percent(1, 1, 1)
| Parameters: |
|
|---|
Passes all arguments to start_command(), but also adds “stdout = PIPE”. Returns the Popen object.
>>> p = pipe_command("g.gisenv")
>>> print(p)
<....Popen object at 0x...>
>>> print(p.communicate()[0])
GISDBASE='/opt/grass-data';
LOCATION_NAME='spearfish60';
MAPSET='glynn';
GUI='text';
MONITOR='x0';
| Parameters: |
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|---|---|
| Returns: | Popen object |
Passes all arguments to pipe_command, then waits for the process to complete, returning its stdout (i.e. similar to shell backticks).
| Parameters: |
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|---|---|
| Returns: | stdout |
Returns the output from running “g.region -gu”, as a dictionary. Example:
| Parameters: |
|
|---|
:param env env
>>> curent_region = region()
>>> # obtain n, s, e and w values
>>> [curent_region[key] for key in "nsew"]
[..., ..., ..., ...]
>>> # obtain ns and ew resulutions
>>> (curent_region['nsres'], curent_region['ewres'])
(..., ...)
| Returns: | dictionary of region values |
|---|
Returns region settings as a string which can used as GRASS_REGION environmental variable.
If no ‘kwargs’ are given then the current region is used. Note that this function doesn’t modify the current region!
See also use_temp_region() for alternative method how to define temporary region used for raster-based computation.
| Parameters: |
|
|---|
os.environ['GRASS_REGION'] = grass.region_env(region='detail')
grass.mapcalc('map=1', overwrite=True)
os.environ.pop('GRASS_REGION')
| Returns: | string with region values |
|---|---|
| Returns: | empty string on error |
Execute a module synchronously
This function passes all arguments to start_command(), then waits for the process to complete. It is similar to subprocess.check_call(), but with the make_command() interface.
For backward compatibility, the function returns exit code by default but only if it is equal to zero. An exception is raised in case of an non-zero return code.
>>> run_command('g.region', raster='elevation')
0
See start_command() for details about parameters and usage.
| Parameters: |
|
|---|---|
| Returns: | 0 with default parameters for backward compatibility only |
| Raises: | CalledModuleError when module returns non-zero return code |
Enable capturing standard error output of modules and print it.
By default, standard error output (stderr) of child processes shows in the same place as output of the parent process. This may not always be the same place as sys.stderr is written. After calling this function, functions in the grass.script package will capture the stderr of child processes and pass it to sys.stderr if there is an error.
Note
This is advantages for interactive shells such as the one in GUI and interactive notebooks such as Jupyer Notebook.
The capturing can be applied only in certain cases, for example in case of run_command() it is applied because run_command() nor its callers do not handle the streams, however feed_command() cannot do capturing because its callers handle the streams.
The previous state is returned. Passing False disables the capturing.
New in version 7.4.
Define behaviour on fatal error (fatal() called)
| Parameters: | raise_exp (bool) – True to raise ScriptError instead of calling sys.exit(1) in fatal() |
|---|---|
| Returns: | current status |
Given a command, mode, and a PATH string, return the path which conforms to the given mode on the PATH, or None if there is no such file.
mode defaults to os.F_OK | os.X_OK. path defaults to the result of os.environ.get(“PATH”), or can be overridden with a custom search path.
| Parameters: |
|
|---|
Returns a Popen object with the command created by make_command. Accepts any of the arguments which Popen() accepts apart from “args” and “shell”.
>>> p = start_command("g.gisenv", stdout=subprocess.PIPE)
>>> print(p)
<...Popen object at 0x...>
>>> print(p.communicate()[0])
GISDBASE='/opt/grass-data';
LOCATION_NAME='spearfish60';
MAPSET='glynn';
GUI='text';
MONITOR='x0';
If the module parameter is the same as Python keyword, add underscore at the end of the parameter. For example, use lambda_=1.6 instead of lambda=1.6.
| Parameters: |
|
|---|---|
| Returns: | Popen object |
Returns the name of a temporary file, created with g.tempfile.
| Parameters: | create (bool) – True to create a file |
|---|---|
| Returns: | path to a tmp file |
Generate a GRASS and SQL compliant random name starting with tmp_ followed by a random part of length “length”
| Parameters: |
|
|---|---|
| Returns: | String with a random name of length “length” starting with a letter |
| Return type: | str |
| Example: |
>>> tempname(12)
'tmp_MxMa1kAS13s9'
Copies the current region to a temporary region with “g.region save=”, then sets WIND_OVERRIDE to refer to that region. Installs an atexit handler to delete the temporary region upon termination.
Display a verbose message using g.message -v
| Parameters: | msg (str) – verbose message to be displayed |
|---|
Get GRASS version as dictionary
>>> print(version())
{'proj4': '4.8.0', 'geos': '3.3.5', 'libgis_revision': '52468',
'libgis_date': '2012-07-27 22:53:30 +0200 (Fri, 27 Jul 2012)',
'version': '7.0.svn', 'date': '2012', 'gdal': '2.0dev',
'revision': '53670'}
Display a warning message using g.message -w
| Parameters: | msg (str) – warning message to be displayed |
|---|
Execute a module with standard input given by stdin parameter.
Passes all arguments to feed_command(), with the string specified by the stdin argument fed to the process’ standard input.
>>> gscript.write_command(
... 'v.in.ascii', input='-',
... stdin='%s|%s' % (635818.8, 221342.4),
... output='view_point')
0
See start_command() for details about parameters and usage.
| Parameters: |
|
|---|---|
| Returns: | 0 with default parameters for backward compatibility only |
| Raises: | CalledModuleError when module returns non-zero return code |
Database related functions to be used in Python scripts.
Usage:
from grass.script import db as grass
grass.db_describe(table)
...
(C) 2008-2015 by the GRASS Development Team This program is free software under the GNU General Public License (>=v2). Read the file COPYING that comes with GRASS for details.
Return the current database connection parameters (interface to db.connect -g). Example:
>>> db_connection()
{'group': '', 'schema': '', 'driver': 'sqlite', 'database': '$GISDBASE/$LOCATION_NAME/$MAPSET/sqlite/sqlite.db'}
:param force True to set up default DB connection if not defined
| Returns: | parsed output of db.connect |
|---|
Return the list of columns for a database table (interface to db.describe -c). Example:
>>> run_command('g.copy', vector='firestations,myfirestations')
0
>>> db_describe('myfirestations')
{'nrows': 71, 'cols': [['cat', 'INTEGER', '20'], ... 'ncols': 22}
>>> run_command('g.remove', flags='f', type='vector', name='myfirestations')
0
| Parameters: |
|
|---|---|
| Returns: | parsed module output |
Perform SQL select statement
Note: one of <em>sql</em>, <em>filename</em>, or <em>table</em> arguments must be provided.
Examples:
>>> run_command('g.copy', vector='firestations,myfirestations')
0
>>> db_select(sql = 'SELECT cat,CITY FROM myfirestations WHERE cat < 4')
(('1', 'Morrisville'), ('2', 'Morrisville'), ('3', 'Apex'))
Simplyfied usage (it performs <tt>SELECT * FROM myfirestations</tt>.)
>>> db_select(table = 'myfirestations')
(('1', '24', 'Morrisville #3', ... 'HS2A', '1.37'))
>>> run_command('g.remove', flags='f', type='vector', name='myfirestations')
0
| Parameters: |
|
|---|
Check if table exists.
If no driver or database are given, then default settings is used (check db_connection()).
>>> run_command('g.copy', vector='firestations,myfirestations')
0
>>> db_table_exist('myfirestations')
True
>>> run_command('g.remove', flags='f', type='vector', name='myfirestations')
0
| Parameters: |
|
|---|---|
| Returns: | True for success, False otherwise |
Return the name of vector connected to the table. It returns None if no vectors are connected to the table.
>>> run_command('g.copy', vector='firestations,myfirestations')
0
>>> db_table_in_vector('myfirestations')
['myfirestations@user1']
>>> db_table_in_vector('mfirestations')
>>> run_command('g.remove', flags='f', type='vector', name='myfirestations')
0
| Parameters: | table (str) – name of table to query |
|---|
Raster related functions to be used in Python scripts.
Usage:
from grass.script import raster as grass
grass.raster_history(map)
(C) 2008-2011 by the GRASS Development Team This program is free software under the GNU General Public License (>=v2). Read the file COPYING that comes with GRASS for details.
Interface to r.mapcalc.
| Parameters: |
|
|---|
Interface to r.mapcalc, doesn’t wait for it to finish, returns Popen object.
>>> output = 'newele'
>>> input = 'elevation'
>>> expr1 = '"%s" = "%s" * 10' % (output, input)
>>> expr2 = '...' # etc.
>>> # launch the jobs:
>>> p1 = mapcalc_start(expr1)
>>> p2 = mapcalc_start(expr2)
...
>>> # wait for them to finish:
>>> p1.wait()
0
>>> p2.wait()
1
>>> run_command('g.remove', flags='f', type='raster', name=output)
| Parameters: |
|
|---|---|
| Returns: | Popen object |
Set the command history for a raster map to the command used to invoke the script (interface to r.support).
| Parameters: | map (str) – map name |
|---|---|
| Returns: | True on success |
| Returns: | False on failure |
Return information about a raster map (interface to r.info -gre). Example:
>>> raster_info('elevation')
{'creator': '"helena"', 'cols': '1500' ... 'south': 215000.0}
| Parameters: | map (str) – map name |
|---|---|
| Returns: | parsed raster info |
Interface to r.what
>>> raster_what('elevation', [[640000, 228000]])
[{'elevation': {'color': '255:214:000', 'label': '', 'value': '102.479'}}]
| Parameters: |
|
|---|
Raster3d related functions to be used in Python scripts.
Usage:
from grass.script import raster3d as grass
grass.raster3d_info(map)
(C) 2008-2016 by the GRASS Development Team This program is free software under the GNU General Public License (>=v2). Read the file COPYING that comes with GRASS for details.
Interface to r3.mapcalc.
| Parameters: |
|
|---|
Return information about a raster3d map (interface to r3.info). Example:
>>> mapcalc3d('volume = row() + col() + depth()')
>>> raster3d_info('volume')
{'vertical_units': '"units"', 'tbres': 1.0, ... 'south': 185000.0}
>>> run_command('g.remove', flags='f', type='raster_3d', name='volume')
0
| Parameters: | map (str) – map name |
|---|---|
| Returns: | parsed raster3d info |
Setup and initialization functions
Function can be used in Python scripts to setup a GRASS environment without starting an actual GRASS session.
Usage:
import os
import sys
import subprocess
# define GRASS Database
# add your path to grassdata (GRASS GIS database) directory
gisdb = os.path.join(os.path.expanduser("~"), "grassdata")
# the following path is the default path on MS Windows
# gisdb = os.path.join(os.path.expanduser("~"), "Documents/grassdata")
# specify (existing) Location and Mapset
location = "nc_spm_08"
mapset = "user1"
# path to the GRASS GIS launch script
# we assume that the GRASS GIS start script is available and on PATH
# query GRASS itself for its GISBASE
# (with fixes for specific platforms)
# needs to be edited by the user
grass7bin = 'grass74'
if sys.platform.startswith('win'):
# MS Windows
grass7bin = r'C:\OSGeo4Win\grass74.bat'
# uncomment when using standalone WinGRASS installer
# grass7bin = r'C:\Program Files (x86)\GRASS GIS 7.2.0\grass74.bat'
# this can be avoided if GRASS executable is added to PATH
elif sys.platform == 'darwin':
# Mac OS X
# TODO: this have to be checked, maybe unix way is good enough
grass7bin = '/Applications/GRASS/GRASS-7.2.app/'
# query GRASS GIS itself for its GISBASE
startcmd = [grass7bin, '--config', 'path']
try:
p = subprocess.Popen(startcmd, shell=False,
stdout=subprocess.PIPE, stderr=subprocess.PIPE)
out, err = p.communicate()
except OSError as error:
sys.exit("ERROR: Cannot find GRASS GIS start script"
" {cmd}: {error}".format(cmd=startcmd[0], error=error))
if p.returncode != 0:
sys.exit("ERROR: Issues running GRASS GIS start script"
" {cmd}: {error}"
.format(cmd=' '.join(startcmd), error=err))
gisbase = out.strip(os.linesep)
# set GISBASE environment variable
os.environ['GISBASE'] = gisbase
# define GRASS-Python environment
grass_pydir = os.path.join(gisbase, "etc", "python")
sys.path.append(grass_pydir)
# import (some) GRASS Python bindings
import grass.script as gscript
import grass.script.setup as gsetup
# launch session
rcfile = gsetup.init(gisbase, gisdb, location, mapset)
# example calls
gscript.message('Current GRASS GIS 7 environment:')
print gscript.gisenv()
gscript.message('Available raster maps:')
for rast in gscript.list_strings(type='raster'):
print rast
gscript.message('Available vector maps:')
for vect in gscript.list_strings(type='vector'):
print vect
# delete the rcfile
os.remove(rcfile)
(C) 2010-2012 by the GRASS Development Team This program is free software under the GNU General Public License (>=v2). Read the file COPYING that comes with GRASS for details.
@author Martin Landa <landa.martin gmail.com> @author Vaclav Petras <wenzeslaus gmail.com>
Initialize system variables to run GRASS modules
This function is for running GRASS GIS without starting it explicitly. No GRASS modules shall be called before call of this function but any module or user script can be called afterwards as if it would be called in an actual GRASS session. GRASS Python libraries are usable as well in general but the ones using C libraries through ctypes are not (which is caused by library path not being updated for the current process which is a common operating system limitation).
To create a (fake) GRASS session a gisrc file is created. Caller is responsible for deleting the gisrc file.
Basic usage:
# ... setup GISBASE and PYTHON path before import
import grass.script as gscript
gisrc = gscript.setup.init("/usr/bin/grass7",
"/home/john/grassdata",
"nc_spm_08", "user1")
# ... use GRASS modules here
# remove the session's gisrc file to end the session
os.remove(gisrc)
| Parameters: |
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|---|---|
| Returns: | path to gisrc file (to be deleted later) |
Get interface description of GRASS commands
Based on gui/wxpython/gui_modules/menuform.py
Usage:
from grass.script import task as gtask
gtask.command_info('r.info')
(C) 2011 by the GRASS Development Team This program is free software under the GNU General Public License (>=v2). Read the file COPYING that comes with GRASS for details.
Convert command list to tuple for run_command() and others
| Parameters: | cmd (list) – GRASS command to be converted |
|---|---|
| Returns: | command as tuple |
Convert command string to tuple for run_command() and others
| Parameters: | cmd (str) – command to be converted |
|---|---|
| Returns: | command as tuple |
Convert command tuple to list.
| Parameters: | cmd (tuple) – GRASS command to be converted |
|---|---|
| Returns: | command in list |
Returns meta information for any GRASS command as dictionary with entries for description, keywords, usage, flags, and parameters, e.g.
>>> command_info('g.tempfile')
{'keywords': ['general', 'support'], 'params': [{'gisprompt': False,
'multiple': False, 'name': 'pid', 'guidependency': '', 'default': '',
'age': None, 'required': True, 'value': '', 'label': '', 'guisection': '',
'key_desc': [], 'values': [], 'values_desc': [], 'prompt': None,
'hidden': False, 'element': None, 'type': 'integer', 'description':
'Process id to use when naming the tempfile'}], 'flags': [{'description':
"Dry run - don't create a file, just prints it's file name", 'value':
False, 'label': '', 'guisection': '', 'suppress_required': False,
'hidden': False, 'name': 'd'}, {'description': 'Print usage summary',
'value': False, 'label': '', 'guisection': '', 'suppress_required': False,
'hidden': False, 'name': 'help'}, {'description': 'Verbose module output',
'value': False, 'label': '', 'guisection': '', 'suppress_required': False,
'hidden': False, 'name': 'verbose'}, {'description': 'Quiet module output',
'value': False, 'label': '', 'guisection': '', 'suppress_required': False,
'hidden': False, 'name': 'quiet'}], 'description': "Creates a temporary
file and prints it's file name.", 'usage': 'g.tempfile pid=integer [--help]
[--verbose] [--quiet]'}
>>> command_info('v.buffer')
['vector', 'geometry', 'buffer']
| Parameters: | cmd (str) – the command to query |
|---|
Returns the XML description for the GRASS cmd (force text encoding to “utf-8”).
The DTD must be located in $GISBASE/gui/xml/grass-interface.dtd, otherwise the parser will not succeed.
| Parameters: | cmd – command (name of GRASS module) |
|---|
This class holds the structures needed for filling by the parser
Parameter blackList is a dictionary with fixed structure, eg.
blackList = {'items' : {'d.legend' : { 'flags' : ['m'], 'params' : [] }},
'enabled': True}
| Parameters: |
|
|---|
Produce an array of command name and arguments for feeding into some execve-like command processor.
| Parameters: |
|
|---|
Get error string produced by get_cmd(ignoreErrors = False)
| Returns: | list of errors |
|---|
Get module’s description
| Parameters: | full (bool) – True for label + desc |
|---|
Find and return a flag by name
Raises ValueError when the flag is not found.
| Parameters: | aFlag (str) – name of the flag |
|---|
Get list of parameters
| Parameters: | element (str) – element name |
|---|
Parse interface of given GRASS module
The name is either GRASS module name (of a module on path) or a full or relative path to an executable.
| Parameters: |
|
|---|
A ElementTree handler for the –interface-description output, as defined in grass-interface.dtd. Extend or modify this and the DTD if the XML output of GRASS’ parser is extended or modified.
| Parameters: |
|
|---|---|
| Returns: | grassTask instance |
Useful functions to be used in Python scripts.
Usage:
from grass.script import utils as gutils
(C) 2014-2016 by the GRASS Development Team This program is free software under the GNU General Public License (>=v2). Read the file COPYING that comes with GRASS for details.
Bases: dict
A general-purpose key-value store.
KeyValue is a subclass of dict, but also allows entries to be read and written using attribute syntax. Example:
>>> reg = KeyValue()
>>> reg['north'] = 489
>>> reg.north
489
>>> reg.south = 205
>>> reg['south']
205
Remove leading directory components and an optional extension from the specified path
| Parameters: |
|
|---|
Decode bytes with default locale and return (unicode) string
No-op if parameter is not bytes (assumed unicode string).
| Parameters: | bytes (bytes) – the bytes to decode |
|---|
>>> decode(b'Südtirol')
u'Südtirol'
>>> decode(u'Südtirol')
u'Südtirol'
>>> decode(1234)
u'1234'
Diffs two text files and returns difference.
| Parameters: |
|
|---|---|
| Returns: | list of strings |
Encode string with default locale and return bytes with that encoding
No-op if parameter is bytes (assumed already encoded). This ensures garbage in, garbage out.
| Parameters: | string (str) – the string to encode |
|---|
>>> encode(b'Südtirol')
b'Südtirol'
>>> decode(u'Südtirol')
b'Südtirol'
>>> decode(1234)
b'1234'
Convert DMS to float.
>>> round(float_or_dms('26:45:30'), 5)
26.75833
>>> round(float_or_dms('26:0:0.1'), 5)
26.00003
| Parameters: | s – DMS value |
|---|---|
| Returns: | float value |
Return the path of the libname contained in the module.
Returns formatted number with number of padding zeros depending on maximum number, used for creating suffix for data series. Does not include the suffix separator.
| Parameters: |
|
|---|
>>> get_num_suffix(10, 1000)
'0010'
>>> get_num_suffix(10, 10)
'10'
Parse a string into a dictionary, where entries are separated by newlines and the key and value are separated by sep (default: =)
>>> parse_key_val('min=20\nmax=50') == {'min': '20', 'max': '50'}
True
>>> parse_key_val('min=20\nmax=50',
... val_type=float) == {'min': 20, 'max': 50}
True
| Parameters: |
|
|---|---|
| Returns: | parsed input (dictionary of keys/values) |
Returns separator from G_OPT_F_SEP appropriately converted to character.
>>> separator('pipe')
'|'
>>> separator('comma')
','
If the string does not match any of the separator keywords, it is returned as is:
>>> separator(', ')
', '
| Parameters: | separator (str) – character or separator keyword |
|---|---|
| Returns: | separator character |
Set sys.path looking in the the local directory GRASS directories.
| Parameters: |
|
|---|
“set_path” example working locally with the source code of a module (r.green) calling the function with all the parameters. Below it is reported the directory structure on the r.green module.
grass_prompt> pwd
~/Download/r.green/r.green.hydro/r.green.hydro.financial
grass_prompt> tree ../../../r.green
../../../r.green
|-- ...
|-- libgreen
| |-- pyfile1.py
| +-- pyfile2.py
+-- r.green.hydro
|-- Makefile
|-- libhydro
| |-- pyfile1.py
| +-- pyfile2.py
|-- r.green.hydro.*
+-- r.green.hydro.financial
|-- Makefile
|-- ...
+-- r.green.hydro.financial.py
21 directories, 125 files
in the source code the function is called with the following parameters:
set_path('r.green', 'libhydro', '..')
set_path('r.green', 'libgreen', os.path.join('..', '..'))
when we are executing the module: r.green.hydro.financial locally from the command line:
grass_prompt> python r.green.hydro.financial.py --ui
In this way we are executing the local code even if the module was already installed as grass-addons and it is available in GRASS standards path.
The function is cheching if the dirname is provided and if the directory exists and it is available using the path provided as third parameter, if yes add the path to sys.path to be importable, otherwise it will check on GRASS GIS standard paths.
Vector related functions to be used in Python scripts.
Usage:
from grass.script import vector as grass
grass.vector_db(map)
(C) 2008-2010 by the GRASS Development Team This program is free software under the GNU General Public License (>=v2). Read the file COPYING that comes with GRASS for details.
Return a dictionary (or a list) of the columns for the database table connected to a vector map (interface to v.info -c).
>>> vector_columns('geology', getDict=True)
{'PERIMETER': {'index': 2, 'type': 'DOUBLE PRECISION'}, 'GEOL250_':
{'index': 3, 'type': 'INTEGER'}, 'SHAPE_area': {'index': 6, 'type':
'DOUBLE PRECISION'}, 'onemap_pro': {'index': 1, 'type': 'DOUBLE
PRECISION'}, 'SHAPE_len': {'index': 7, 'type': 'DOUBLE PRECISION'},
'cat': {'index': 0, 'type': 'INTEGER'}, 'GEOL250_ID': {'index': 4, 'type':
'INTEGER'}, 'GEO_NAME': {'index': 5, 'type': 'CHARACTER'}}
>>> vector_columns('geology', getDict=False)
['cat',
'onemap_pro',
'PERIMETER',
'GEOL250_',
'GEOL250_ID',
'GEO_NAME',
'SHAPE_area',
'SHAPE_len']
| Parameters: |
|
|---|---|
| Returns: | dictionary/list of columns |
Return the database connection details for a vector map (interface to v.db.connect -g). Example:
>>> vector_db('geology')
{1: {'layer': 1, ... 'table': 'geology'}}
| Parameters: |
|
|---|---|
| Returns: | dictionary |
Get attribute data of selected vector map layer.
Function returns list of columns and dictionary of values ordered by key column value. Example:
>>> print vector_db_select('geology')['columns']
['cat', 'onemap_pro', 'PERIMETER', 'GEOL250_', 'GEOL250_ID', 'GEO_NAME', 'SHAPE_area', 'SHAPE_len']
>>> print vector_db_select('geology')['values'][3]
['3', '579286.875', '3335.55835', '4', '3', 'Zml', '579286.829631', '3335.557182']
>>> print vector_db_select('geology', columns = 'GEO_NAME')['values'][3]
['Zml']
| Parameters: |
|
|---|---|
| Returns: | dictionary (‘columns’ and ‘values’) |
Set the command history for a vector map to the command used to invoke the script (interface to v.support).
| Parameters: | map (str) – mapname |
|---|---|
| Returns: | v.support output |
Return information about a vector map (interface to v.info). Example:
>>> vector_info('geology')
{'comment': '', 'projection': 'Lambert Conformal Conic' ... 'south': 10875.8272320917}
| Parameters: |
|
|---|---|
| Returns: | parsed vector info |
Return information about a vector map (interface to v.info -t). Example:
>>> vector_info_topo('geology')
{'lines': 0, 'centroids': 1832, 'boundaries': 3649, 'points': 0,
'primitives': 5481, 'islands': 907, 'nodes': 2724, 'map3d': False,
'areas': 1832}
| Parameters: |
|
|---|---|
| Returns: | parsed output |
Return the database connection details for a vector map layer. If db connection for given layer is not defined, fatal() is called.
| Parameters: |
|
|---|---|
| Returns: | parsed output |
Query vector map at given locations
To query one vector map at one location
print grass.vector_what(map='archsites', coord=(595743, 4925281),
distance=250)
[{'Category': 8, 'Map': 'archsites', 'Layer': 1, 'Key_column': 'cat',
'Database': '/home/martin/grassdata/spearfish60/PERMANENT/dbf/',
'Mapset': 'PERMANENT', 'Driver': 'dbf',
'Attributes': {'str1': 'No_Name', 'cat': '8'},
'Table': 'archsites', 'Type': 'Point', 'Id': 8}]
To query one vector map with multiple layers (no additional parameters required)
for q in grass.vector_what(map='some_map', distance=100.0,
coord=(596532.357143,4920486.21429)):
print q['Map'], q['Layer'], q['Attributes']
new_bug_sites 1 {'str1': 'Beetle_site', 'GRASSRGB': '', 'cat': '80'}
new_bug_sites 2 {'cat': '80'}
To query more vector maps at one location
for q in grass.vector_what(map=('archsites', 'roads'),
coord=(595743, 4925281), distance=250):
print q['Map'], q['Attributes']
archsites {'str1': 'No_Name', 'cat': '8'}
roads {'label': 'interstate', 'cat': '1'}
To query one vector map at more locations
for q in grass.vector_what(map='archsites', distance=250,
coord=[(595743, 4925281), (597950, 4918898)]):
print q['Map'], q['Attributes']
archsites {'str1': 'No_Name', 'cat': '8'}
archsites {'str1': 'Bob_Miller', 'cat': '22'}
| Parameters: |
|
|---|---|
| Returns: | parsed list |
Python interface to launch GRASS GIS modules in scripts
Note: A new GRASS GIS stable version has been released: GRASS GIS 7.8. Go directly to the new manual page here
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