# -*- coding: utf-8 -*-
"""
Created on Sat Jun 16 20:24:56 2012
@author: soeren
"""
from __future__ import (nested_scopes, generators, division, absolute_import,
with_statement, print_function, unicode_literals)
import optparse
#import numpy as np
import time
import collections
import copy
import cProfile
import sys, os
from jinja2 import Template
sys.path.append(os.getcwd())
sys.path.append("%s/.."%(os.getcwd()))
import grass.lib.gis as libgis
import grass.lib.raster as libraster
import grass.script as core
import grass.pygrass
import ctypes
[docs]def test__RasterSegment_value_access__if():
test_a = pygrass.RasterSegment(name="test_a")
test_a.open(mode="r")
test_c = pygrass.RasterSegment(name="test_c")
test_c.open(mode="w", mtype="CELL", overwrite=True)
buff_a = pygrass.Buffer(test_a.cols, test_a.mtype)
for row in range(test_a.rows):
test_a.get_row(row, buff_a)
for col in range(test_a.cols):
test_c.put(row, col, buff_a[col] > 50)
test_a.close()
test_c.close()
[docs]def test__RasterSegment_value_access__add():
test_a = pygrass.RasterSegment(name="test_a")
test_a.open(mode="r")
test_b = pygrass.RasterSegment(name="test_b")
test_b.open(mode="r")
test_c = pygrass.RasterSegment(name="test_c")
test_c.open(mode="w", mtype="DCELL", overwrite=True)
buff_a = pygrass.Buffer(test_a.cols, test_a.mtype)
buff_b = pygrass.Buffer(test_b.cols, test_b.mtype)
for row in range(test_a.rows):
test_a.get_row(row, buff_a)
test_b.get_row(row,buff_b)
for col in range(test_a.cols):
test_c.put(row, col, buff_a[col] + buff_b[col])
test_a.close()
test_b.close()
test_c.close()
[docs]def test__RasterSegment_row_access__if():
test_a = pygrass.RasterSegment(name="test_a")
test_a.open(mode="r")
test_c = pygrass.RasterSegment(name="test_c")
test_c.open(mode="w", mtype="CELL", overwrite=True)
buff_a = pygrass.Buffer(test_a.cols, test_a.mtype)
for row in range(test_a.rows):
test_a.get_row(row, buff_a)
test_c.put_row(row, buff_a > 50)
test_a.close()
test_c.close()
[docs]def test__RasterSegment_row_access__add():
test_a = pygrass.RasterSegment(name="test_a")
test_a.open(mode="r")
test_b = pygrass.RasterSegment(name="test_b")
test_b.open(mode="r")
test_c = pygrass.RasterSegment(name="test_c")
test_c.open(mode="w", mtype="DCELL", overwrite=True)
buff_a = pygrass.Buffer(test_a.cols, test_a.mtype)
buff_b = pygrass.Buffer(test_b.cols, test_b.mtype)
for row in range(test_a.rows):
test_a.get_row(row, buff_a)
test_b.get_row(row,buff_b)
test_c.put_row(row, buff_a + buff_b)
test_a.close()
test_b.close()
test_c.close()
[docs]def test__RasterRow_value_access__add():
test_a = pygrass.RasterRow(name="test_a")
test_a.open(mode="r")
test_b = pygrass.RasterRow(name="test_b")
test_b.open(mode="r")
test_c = pygrass.RasterRow(name="test_c")
test_c.open(mode="w", mtype="FCELL", overwrite=True)
buff_a = pygrass.Buffer(test_a.cols, test_a.mtype)
buff_b = pygrass.Buffer(test_b.cols, test_b.mtype)
buff_c = pygrass.Buffer(test_b.cols, test_b.mtype)
for row in range(test_a.rows):
test_a.get_row(row, buff_a)
test_b.get_row(row,buff_b)
for col in range(test_a.cols):
buff_c[col] = buff_a[col] + buff_b[col]
test_c.put_row(buff_c)
test_a.close()
test_b.close()
test_c.close()
[docs]def test__RasterRow_value_access__if():
test_a = pygrass.RasterRow(name="test_a")
test_a.open(mode="r")
test_c = pygrass.RasterRow(name="test_c")
test_c.open(mode="w", mtype="CELL", overwrite=True)
buff_a = pygrass.Buffer(test_a.cols, test_a.mtype)
buff_c = pygrass.Buffer(test_a.cols, test_a.mtype)
for row in range(test_a.rows):
test_a.get_row(row, buff_a)
for col in range(test_a.cols):
buff_c[col] = buff_a[col] > 50
test_c.put_row(buff_c)
test_a.close()
test_c.close()
[docs]def test__RasterRowIO_row_access__add():
test_a = pygrass.RasterRowIO(name="test_a")
test_a.open(mode="r")
test_b = pygrass.RasterRowIO(name="test_b")
test_b.open(mode="r")
test_c = pygrass.RasterRowIO(name="test_c")
test_c.open(mode="w", mtype="FCELL", overwrite=True)
buff_a = pygrass.Buffer(test_a.cols, test_a.mtype)
buff_b = pygrass.Buffer(test_b.cols, test_b.mtype)
for row in range(test_a.rows):
test_a.get_row(row, buff_a)
test_b.get_row(row,buff_b)
test_c.put_row(buff_a + buff_b)
test_a.close()
test_b.close()
test_c.close()
[docs]def test__RasterRowIO_row_access__if():
test_a = pygrass.RasterRowIO(name="test_a")
test_a.open(mode="r")
test_c = pygrass.RasterRowIO(name="test_c")
test_c.open(mode="w", mtype="CELL", overwrite=True)
buff_a = pygrass.Buffer(test_a.cols, test_a.mtype)
for row in range(test_a.rows):
test_a.get_row(row, buff_a)
test_c.put_row(buff_a > 50)
test_a.close()
test_c.close()
[docs]def test__RasterRow_row_access__add():
test_a = pygrass.RasterRow(name="test_a")
test_a.open(mode="r")
test_b = pygrass.RasterRow(name="test_b")
test_b.open(mode="r")
test_c = pygrass.RasterRow(name="test_c")
test_c.open(mode="w", mtype="FCELL", overwrite=True)
buff_a = pygrass.Buffer(test_a.cols, test_a.mtype)
buff_b = pygrass.Buffer(test_b.cols, test_b.mtype)
for row in range(test_a.rows):
test_a.get_row(row, buff_a)
test_b.get_row(row,buff_b)
test_c.put_row(buff_a + buff_b)
test_a.close()
test_b.close()
test_c.close()
[docs]def test__RasterRow_row_access__if():
test_a = pygrass.RasterRow(name="test_a")
test_a.open(mode="r")
test_c = pygrass.RasterRow(name="test_c")
test_c.open(mode="w", mtype="CELL", overwrite=True)
buff_a = pygrass.Buffer(test_a.cols, test_a.mtype)
for row in range(test_a.rows):
test_a.get_row(row, buff_a)
test_c.put_row(buff_a > 50)
test_a.close()
test_c.close()
[docs]def test__mapcalc__add():
core.mapcalc("test_c = test_a + test_b", quite=True, overwrite=True)
[docs]def test__mapcalc__if():
core.mapcalc("test_c = if(test_a > 50, 1, 0)", quite=True, overwrite=True)
[docs]def mytimer(func, runs=1):
times = []
t = 0.0
for _ in range(runs):
start = time.time()
func()
end = time.time()
times.append(end - start)
t = t + end - start
return t/runs, times
[docs]def run_benchmark(resolution_list, runs, testdict, profile):
regions = []
for resolution in resolution_list:
core.use_temp_region()
core.run_command('g.region', e=50, w=-50, n=50, s=-50, res=resolution, flags='p')
# Adjust the computational region for this process
region = libgis.Cell_head()
libraster.Rast_get_window(ctypes.byref(region))
region.e = 50
region.w = -50
region.n = 50
region.s = -50
region.ew_res = resolution
region.ns_res = resolution
libgis.G_adjust_Cell_head(ctypes.byref(region), 0, 0)
libraster.Rast_set_window(ctypes.byref(region))
libgis.G_set_window(ctypes.byref(region))
# Create two raster maps with random numbers
core.mapcalc("test_a = rand(0, 100)", quite=True, overwrite=True)
core.mapcalc("test_b = rand(0.0, 1.0)", quite=True, overwrite=True)
result = collections.OrderedDict()
result['res'] = resolution
result['cols'] = region.cols
result['rows'] = region.rows
result['cells'] = region.rows * region.cols
result['results'] = copy.deepcopy(testdict)
for execmode, operation in result['results'].items():
print(execmode)
for oper, operdict in operation.items():
operdict['time'], operdict['times'] = mytimer(operdict['func'],runs)
if profile:
filename = '{0}_{1}_{2}'.format(execmode, oper, profile)
cProfile.runctx(operdict['func'].__name__ + '()',
globals(), locals(), filename = filename)
print((' {0}: {1: 40.6f}s'.format(oper, operdict['time'])))
del(operdict['func'])
regions.append(result)
core.del_temp_region()
return regions
[docs]def get_testlist(loc):
testlist = [test for test in list(loc.keys()) if 'test' in test[:5]]
testlist.sort()
return testlist
[docs]def get_testdict(testlist):
testdict = collections.OrderedDict()
for testfunc in testlist:
#import pdb; pdb.set_trace()
dummy, execmode, operation = testfunc.split('__')
if execmode in list(testdict.keys()):
testdict[execmode][operation] = collections.OrderedDict()
testdict[execmode][operation]['func'] = loc[testfunc]
else:
testdict[execmode] = collections.OrderedDict()
testdict[execmode][operation] = collections.OrderedDict()
testdict[execmode][operation]['func'] = loc[testfunc]
return testdict
[docs]def print_test(testdict):
for execmode, operation in testdict.items():
print(execmode)
for oper, operdict in operation.items():
print(' ', oper)
for key, value in operdict.items():
print(' ', key)
TXT = """
{% for region in regions %}
{{ '#'*60 }}
### Benchmark cols = {{ region.cols }} rows = {{ region.rows}} cells = {{ region.cells }}
{{ '#'*60 }}
# equation: c = a + b
{% for execmode, operation in region.results.iteritems() %}
{{ "%-30s - %5s % 12.6fs"|format(execmode, 'add', operation.add.time) }}
{%- endfor %}
# equation: c = if a > 50 then 1 else 0
{% for execmode, operation in region.results.iteritems() %}
{{ "%-30s - %5s % 12.6fs"|format(execmode, 'if', operation.if.time) }}
{%- endfor %}
{%- endfor %}
"""
CSV = """Class; Mode; Operation;
"""
RST = """
"""
#>>> txt = Template(TxT)
#>>> txt.render(name='John Doe')
[docs]def get_txt(results):
txt = Template(TXT)
return txt.render(regions = results)
#classes for required options
strREQUIRED = 'required'
[docs]class OptionWithDefault(optparse.Option):
ATTRS = optparse.Option.ATTRS + [strREQUIRED]
def __init__(self, *opts, **attrs):
if attrs.get(strREQUIRED, False):
attrs['help'] = '(Required) ' + attrs.get('help', "")
optparse.Option.__init__(self, *opts, **attrs)
[docs]class OptionParser(optparse.OptionParser):
def __init__(self, **kwargs):
kwargs['option_class'] = OptionWithDefault
optparse.OptionParser.__init__(self, **kwargs)
[docs] def check_values(self, values, args):
for option in self.option_list:
if hasattr(option, strREQUIRED) and option.required:
if not getattr(values, option.dest):
self.error("option {} is required".format(str(option)))
return optparse.OptionParser.check_values(self, values, args)
[docs]def main(testdict):
"""Main function"""
#usage
usage = "usage: %prog [options] raster_map"
parser = OptionParser(usage=usage)
# ntime
parser.add_option("-n", "--ntimes", dest="ntime",default=5, type="int",
help="Number of run for each test.")
# res
parser.add_option("-r", "--resolution", action="store", type="string",
dest="res", default = '1,0.25',
help="Resolution list separate by comma.")
# fmt
parser.add_option("-f", "--fmt", action="store", type="string",
dest="fmt", default = 'txt',
help="Choose the output format: 'txt', 'csv', 'rst'.")
# output
parser.add_option("-o", "--output", action="store", type="string",
dest="output", help="The output filename.")
# store
parser.add_option("-s", "--store", action="store", type="string",
dest="store", help="The filename of pickle obj.")
# profile
parser.add_option("-p", "--profile", action="store", type="string",
dest="profile", help="The filename of the profile results.")
#return options and argument
options, args = parser.parse_args()
res = [float(r) for r in options.res.split(',')]
#res = [1, 0.25, 0.1, 0.05]
results = run_benchmark(res, options.ntime, testdict, options.profile)
if options.store:
import pickle
output = open(options.store, 'wb')
pickle.dump(results, output)
output.close()
#import pdb; pdb.set_trace()
print(get_txt(results))
#add options
if __name__ == "__main__":
#import pdb; pdb.set_trace()
loc = locals()
testlist = get_testlist(loc)
testdict = get_testdict(testlist)
#print_test(testdict)
#import pdb; pdb.set_trace()
main(testdict)
